"Closeness to space" doesn't affect the gravitational force due to a particular piece of matter. Now, if water was as dense as rock, then undersea mountains wouldn't make such a difference to the gravitational field.
I'm trying to understand why you think "closeness to space" would be a factor. Maybe you are thinking that the seabed is going to be further from a detector than the terrain would be?
It is true that the further from the Earth the detector is, the smaller the anomaly will be.